ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gk4C3 - ECOD Domain | ECOD

ECOD/Domains/e8gk4C3

e8gk4C3

UID: 003085670

PDB

Range: C:564-667
PDB: 8GK4 chain C(all domains)

Molecule: Efflux pump membrane transporter

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyACR_tran(304.28.1.1)

Ligands

in contact, ≤ 4 Å

ChloramphenicolCLM
drugDrugBank DB00446

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 8GK4 RCSB PDB: 8GK4 PDBe: 8GK4

Downloads

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