ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gkrA1 - ECOD Domain | ECOD

ECOD/Domains/e8gkrA1

e8gkrA1

UID: 003085708

PDB

Range: A:2-27,A:88-242
PDB: 8GKR chain A(all domains)

Molecule: DNA polymerase eta

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

2'-deoxy-5-fluorouridine 5'-(tetrahydrogen triphosphate)B7P
Calcium ionCA
metal

+ 1 additive (Glycerol)

GlycerolGOL

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 8GKR RCSB PDB: 8GKR PDBe: 8GKR

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.