ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gn1V1 - ECOD Domain | ECOD

ECOD/Domains/e8gn1V1

e8gn1V1

UID: 003087761

PDB

Range: V:1-137
PDB: 8GN1 chain V(all domains)

Molecule: Cytochrome c-550

3D Structure

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Related Domains

Browse other domains in Cytochrom_C550 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C550(107.1.1.10)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
Ferroheme CHEC
drugDrugBank DB03317

Pfam Families

PF14495Cytochrom_C550

Cytochrome c-550 domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 8GN1 RCSB PDB: 8GN1 PDBe: 8GN1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Heptyl 1-Thiohexopyranoside

drugDrugBank DB04450

+ 2 additives (Dimethyl sulfoxide, Glycerin)

Dimethyl sulfoxideDMS
DrugBank DB01093
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.