ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gnkA1 - ECOD Domain | ECOD

ECOD/Domains/e8gnkA1

e8gnkA1

UID: 003087845

PDB

Range: A:50-574
PDB: 8GNK chain A(all domains)

Molecule: Sodium- and chloride-dependent GABA transporter 1

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

gamma-Aminobutyric acidABU
drugDrugBank DB02530
CholesterolCLR
drugDrugBank DB04540
N-Acetylglucosamine

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

ECOD PDB View: 8GNK RCSB PDB: 8GNK PDBe: 8GNK

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB00141

Chloride ionCL

Sodium ionNA

metal

PhosphatidylethanolaminePTY

Shown in the structure viewer. Drug annotations from DrugDomain.