ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gu1A2 - ECOD Domain | ECOD

ECOD/Domains/e8gu1A2

e8gu1A2

UID: 003088107

PDB

Range: A:8-94,A:180-241
PDB: 8GU1 chain A(all domains)

Molecule: Putative amino acid-binding periplasmic ABC transporter protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

Pimozide1II
drugDrugBank DB01100

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 8GU1 RCSB PDB: 8GU1 PDBe: 8GU1

Downloads

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