ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8h1rA2 - ECOD Domain | ECOD

ECOD/Domains/e8h1rA2

e8h1rA2

UID: 003088556

PDB

Range: A:323-918
PDB: 8H1R chain A(all domains)

Molecule: LPS-assembly protein LptD

3D Structure

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Related Domains

Browse other domains in LptD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupLPS-assembly protein LptD(5084.10)

TT-groupLPS-assembly protein LptD(5084.10.1)

FFamilyLptD(5084.10.1.1)

Ligands

in contact, ≤ 4 Å

(2R)-3-{[(2S)-3-HYDROXY-2-(PALMITOYLAMINO)PROPYL]THIO}PROPANE-1,2-DIYL DIHEXADECANOATEPCJ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LPS transport system D

ClanCL0193MBB

External Links

ECOD PDB View: 8H1R RCSB PDB: 8H1R PDBe: 8H1R

Downloads

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