ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8hl7A1 - ECOD Domain | ECOD

ECOD/Domains/e8hl7A1

e8hl7A1

UID: 003090402

PDB

Range: A:15-222
PDB: 8HL7 chain A(all domains)

Molecule: Protein N-lysine methyltransferase METTL21D

3D Structure

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Related Domains

Browse other domains in Methyltransf_16 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_16(2003.1.5.73)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 3 additives (Acetate, Formic acid, Glycerin)

AcetateACT
DrugBank DB14511

Pfam Families

PF10294Methyltransf_16

Lysine methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8HL7 RCSB PDB: 8HL7 PDBe: 8HL7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Formic acidFMT

DrugBank DB01942

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.