ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8hnlR1 - ECOD Domain | ECOD

ECOD/Domains/e8hnlR1

e8hnlR1

UID: 003090462

PDB

Range: R:42-336
PDB: 8HNL chain R(all domains)

Molecule: Soluble cytochrome b562,C-X-C chemokine receptor type 3,Oplophorus-luciferin 2-monooxygenase catalytic subunit

3D Structure

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Related Domains

Browse other domains in 7tm_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamily7tm_1(5001.1.1.1)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540
(3S)-N-[(2S)-5-carbamimidamido-1-(cyclohexylmethylamino)-1-oxidanylidene-pentan-2-yl]-2-(4-oxidanylidene-4-phenyl-butanoyl)-3,4-dihydro-1H-isoquinoline-3-carboxamide4AI

Shown in the structure viewer. Drug annotations from .

Pfam Families

7 transmembrane receptor (rhodopsin family)

ClanCL0192GPCR_A

External Links

ECOD PDB View: 8HNL RCSB PDB: 8HNL PDBe: 8HNL

Downloads

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