ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8hnmR1 - ECOD Domain | ECOD

ECOD/Domains/e8hnmR1

e8hnmR1

UID: 003090467

PDB

Range: R:60-336
PDB: 8HNM chain R(all domains)

Molecule: Soluble cytochrome b562,C-X-C chemokine receptor type 3,Oplophorus-luciferin 2-monooxygenase catalytic subunit

3D Structure

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Related Domains

Browse other domains in 7tm_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamily7tm_1(5001.1.1.1)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540
[4-(2-bromophenyl)phenyl]methyl-[[(1R,5S)-6,6-dimethyl-2-bicyclo[3.1.1]hept-2-enyl]methyl]-dimethyl-azanium4IE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

7 transmembrane receptor (rhodopsin family)

ClanCL0192GPCR_A

External Links

ECOD PDB View: 8HNM RCSB PDB: 8HNM PDBe: 8HNM

Downloads

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