ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8i08C1 - ECOD Domain | ECOD

ECOD/Domains/e8i08C1

e8i08C1

UID: 003090776

PDB

Range: C:185-362
PDB: 8I08 chain C(all domains)

Molecule: Glyoxylate carboligase

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilyTPP_enzyme_M(2003.1.4.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONEUQ0

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00205TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8I08 RCSB PDB: 8I08 PDBe: 8I08

Downloads

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