ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8iugK1 - ECOD Domain | ECOD

ECOD/Domains/e8iugK1

e8iugK1

UID: 003093614

PDB

Range: K:6-55
PDB: 8IUG chain K(all domains)

Molecule: Antenna complex alpha/beta subunit

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
[(2~{R},3~{S},4~{S},5~{R},6~{R})-6-[(6~{E},8~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E})-2,6,10,14,19,23-hexamethyl-25-(2,6,6-trimethylcyclohexen-1-yl)pentacosa-6,8,10,12,14,16,18,20,22,24-decaen-2-yl]oxy-3,4,5-tris(oxidanyl)oxan-2-yl]methyl pentadecanoateU42

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 8IUG RCSB PDB: 8IUG PDBe: 8IUG

Downloads

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gamma-CaroteneU4Z

Shown in the structure viewer. Drug annotations from DrugDomain.