ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8je4A1 - ECOD Domain | ECOD

ECOD/Domains/e8je4A1

e8je4A1

UID: 003096878

PDB

Range: A:7-301
PDB: 8JE4 chain A(all domains)

Molecule: prenyltransferase, LimF

3D Structure

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Related Domains

Browse other domains in DUF5838 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPrenyltransferase-like(4194)

HH-groupPrenyltransferase-like(4194.1)

TT-groupPrenyltransferase-like(4194.1.1)

FFamilyDUF5838(4194.1.1.3)

Ligands

in contact, ≤ 4 Å

ThiopyrophosphatePIS
drugDrugBank DB02423
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19156DUF5838

Family of unknown function (DUF5838)

External Links

ECOD PDB View: 8JE4 RCSB PDB: 8JE4 PDBe: 8JE4

Downloads

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