ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8jtdD3 - ECOD Domain | ECOD

ECOD/Domains/e8jtdD3

e8jtdD3

UID: 003097480

PDB

Range: D:32-119,D:203-255,D:474-506
PDB: 8JTD chain D(all domains)

Molecule: gp120 protein of HIV Envelope trimer

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 8JTD RCSB PDB: 8JTD PDBe: 8JTD

Downloads

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