ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8jtmC3 - ECOD Domain | ECOD

ECOD/Domains/e8jtmC3

e8jtmC3

UID: 003097489

PDB

Range: C:32-119,C:203-255,C:474-506
PDB: 8JTM chain C(all domains)

Molecule: gp120 protein of HIV envelope trimer

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 8JTM RCSB PDB: 8JTM PDBe: 8JTM

Downloads

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