ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8khuF1 - ECOD Domain | ECOD

ECOD/Domains/e8khuF1

e8khuF1

UID: 003097981

PDB

Range: F:1-155
PDB: 8KHU chain F(all domains)

Molecule: Capsid protein

3D Structure

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Related Domains

Browse other domains in Hepatitis_core →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHepatitis B viral capsid (hbcag)(625)

HH-groupHepatitis B viral capsid (hbcag)(625.1)

TT-groupHepatitis B viral capsid (hbcag)(625.1.1)

FFamilyHepatitis_core(625.1.1.1)

Ligands

in contact, ≤ 4 Å

(6~{S},7~{R})-6,7-dimethyl-3-(2-oxidanylidenepyrrolidin-1-yl)-~{N}-[3,4,5-tris(fluoranyl)phenyl]-6,7-dihydro-4~{H}-pyrazolo[1,5-a]pyrazine-5-carboxamideVX0

+ 2 additives (Glycerin, Isopropyl alcohol)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00906Hepatitis_core

Hepatitis core antigen

External Links

ECOD PDB View: 8KHU RCSB PDB: 8KHU PDBe: 8KHU

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Isopropyl alcohol

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.