ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8om1O1 - ECOD Domain | ECOD

ECOD/Domains/e8om1O1

e8om1O1

UID: 003098620

PDB

Range: O:1-320
PDB: 8OM1 chain O(all domains)

Molecule: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilydNK(2004.1.1.70)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181
1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
Magnesium ionMG

Pfam Families

Deoxynucleoside kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 8OM1 RCSB PDB: 8OM1 PDBe: 8OM1

Downloads

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metal

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.