ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8op9E1 - ECOD Domain | ECOD

ECOD/Domains/e8op9E1

e8op9E1

UID: 003098826

PDB

Range: E:78-280
PDB: 8OP9 chain E(all domains)

Molecule: Gamma-aminobutyric acid receptor subunit rho-1

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

gamma-Aminobutyric acidABU
drugDrugBank DB02530
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 8OP9 RCSB PDB: 8OP9 PDBe: 8OP9

Downloads

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Drug annotations from DrugDomain.