ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8orpB1 - ECOD Domain | ECOD

ECOD/Domains/e8orpB1

e8orpB1

UID: 003098966

PDB

Range: B:383-476
PDB: 8ORP chain B(all domains)

Molecule: Alpha-amylase A

3D Structure

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Related Domains

Browse other domains in Alpha-amylase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyAlpha-amylase_C(12.1.1.3)

Ligands

in contact, ≤ 4 Å

Strontium ionSR
metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02806Alpha-amylase_C

Alpha amylase, C-terminal all-beta domain

ClanCL0369GHD

External Links

ECOD PDB View: 8ORP RCSB PDB: 8ORP PDBe: 8ORP

Downloads

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