ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8orpB2 - ECOD Domain | ECOD

ECOD/Domains/e8orpB2

e8orpB2

UID: 003098967

PDB

Range: B:1-382
PDB: 8ORP chain B(all domains)

Molecule: Alpha-amylase A

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Strontium ionSR
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8ORP RCSB PDB: 8ORP PDBe: 8ORP

Downloads

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Drug annotations from DrugDomain.