ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8p5rB4 - ECOD Domain | ECOD

ECOD/Domains/e8p5rB4

e8p5rB4

UID: 003100617

PDB

Range: B:358-814
PDB: 8P5R chain B(all domains)

Molecule: Multifunctional 2-oxoglutarate metabolism enzyme

3D Structure

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Related Domains

Browse other domains in E1_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyE1_dh(7574.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Dehydrogenase E1 component

ClanCL0254THDP-binding

External Links

ECOD PDB View: 8P5R RCSB PDB: 8P5R PDBe: 8P5R

Downloads

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