ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8pejB2 - ECOD Domain | ECOD

ECOD/Domains/e8pejB2

e8pejB2

UID: 003101201

PDB

Range: B:416-575
PDB: 8PEJ chain B(all domains)

Molecule: Beta-galactosidase, putative, bgl35A

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF5597 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyDUF5597(12.1.1.38)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
(1~{S},2~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentolYGX

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18120DUF5597

Domain of unknown function (DUF5597)

ClanCL0369GHD

External Links

ECOD PDB View: 8PEJ RCSB PDB: 8PEJ PDBe: 8PEJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure