ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8pejF1 - ECOD Domain | ECOD

ECOD/Domains/e8pejF1

e8pejF1

UID: 003101206

PDB

Range: F:416-575
PDB: 8PEJ chain F(all domains)

Molecule: Beta-galactosidase, putative, bgl35A

3D Structure

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Related Domains

Browse other domains in DUF5597 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyDUF5597(12.1.1.38)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
(1~{S},2~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentolYGX

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF18120DUF5597

Domain of unknown function (DUF5597)

ClanCL0369GHD

External Links

ECOD PDB View: 8PEJ RCSB PDB: 8PEJ PDBe: 8PEJ

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.