ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hdpA1 - ECOD Domain | ECOD

ECOD/Domains/e2hdpA1

e2hdpA1

UID: 000310194

PDB

Range: A:429-491
PDB: 2HDP chain A(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: Ubiquitin-protein ligase E3 Mdm2

3D Structure

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Related Domains

Browse other domains in zf-C3HC4_3 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4_3(376.1.1.22)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13920zf-C3HC4_3

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

ECOD PDB View: 2HDP RCSB PDB: 2HDP PDBe: 2HDP UniProt: Q00987

Downloads

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