ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1na1C1 - ECOD Domain | ECOD

ECOD/Domains/e1na1C1

e1na1C1

UID: 000031022

PDB

Range: C:1-236
PDB: 1NA1 chain C(all domains)
UniProt: P03303 (all domains)

Molecule: Coat protein VP3

3D Structure

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Related Domains

Browse other domains in Rhv, Calici_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv, Calici_coat(10.2.1.88)

Ligands

in contact, ≤ 4 Å

PleconarilW11
drugDrugBank DB05105

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1NA1 RCSB PDB: 1NA1 PDBe: 1NA1 UniProt: P03303

Downloads

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