ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8qniA4 - ECOD Domain | ECOD

ECOD/Domains/e8qniA4

e8qniA4

UID: 003102861

PDB

Range: A:347-420
PDB: 8QNI chain A(all domains)

Molecule: E3 ubiquitin-protein ligase CBL-B

3D Structure

Loading viewer...

Related Domains

Browse other domains in zf-C3HC4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4(376.1.1.1)

Ligands

in contact, ≤ 4 Å

2-[[(2~{S})-2-methylmorpholin-4-yl]methyl]-~{N}-[(3~{S})-2-oxidanylidene-5-phenyl-1,3-dihydropyrido[3,4-e][1,4]diazepin-3-yl]benzamideW7R
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00097zf-C3HC4

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

ECOD PDB View: 8QNI RCSB PDB: 8QNI PDBe: 8QNI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure