ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8scpD2 - ECOD Domain | ECOD

ECOD/Domains/e8scpD2

e8scpD2

UID: 003103125

PDB

Range: D:469-643
PDB: 8SCP chain D(all domains)

Molecule: DNA polymerase I

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha bundles(a.7)

XX-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970)

HH-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1)

TT-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1.1)

FFamilyDNA_pol_A(4970.1.1.2)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 8SCP RCSB PDB: 8SCP PDBe: 8SCP

Downloads

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Drug annotations from DrugDomain.