ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8scqD4 - ECOD Domain | ECOD

ECOD/Domains/e8scqD4

e8scqD4

UID: 003103135

PDB

Range: D:644-668,D:793-876
PDB: 8SCQ chain D(all domains)

Molecule: DNA polymerase I

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_A(304.48.1.6)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181
Calcium ionCA
metal
Diphosphate

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 8SCQ RCSB PDB: 8SCQ PDBe: 8SCQ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.