ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8sstA1 - ECOD Domain | ECOD

ECOD/Domains/e8sstA1

e8sstA1

UID: 003105382

PDB

Range: A:405-461
PDB: 8SST chain A(all domains)

Molecule: Transcriptional repressor CTCF

3D Structure

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Related Domains

Browse other domains in zf-C2H2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2(386.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00096zf-C2H2

Zinc finger, C2H2 type

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 8SST RCSB PDB: 8SST PDBe: 8SST

Downloads

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