ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8tmsB1 - ECOD Domain | ECOD

ECOD/Domains/e8tmsB1

e8tmsB1

UID: 003106937

PDB

Range: B:-4-283
PDB: 8TMS chain B(all domains)

Molecule: Pectinesterase

3D Structure

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Related Domains

Browse other domains in Pectinesterase →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectinesterase(207.2.1.4)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01095Pectinesterase

Pectinesterase

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 8TMS RCSB PDB: 8TMS PDBe: 8TMS

Downloads

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