ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2hwd11 - ECOD Domain | ECOD

ECOD/Domains/e2hwd11

e2hwd11

UID: 000031082

PDB

Range: 1:5-287
PDB: 2HWD chain 1(all domains)
UniProt: P23008 (all domains)

Molecule: HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhv →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv(10.2.1.1)

Ligands

in contact, ≤ 4 Å

5-(3-(2,6-dichloro-4-(4,5-dihydro-2-oxazolyl)phenoxy)propyl)-3-methyl isoxazoleW91
drugDrugBank DB08728

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 2HWD RCSB PDB: 2HWD PDBe: 2HWD UniProt: P23008

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure