ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7y28A1 - ECOD Domain | ECOD

ECOD/Domains/e7y28A1

e7y28A1

UID: 003110791

PDB

Range: A:1420-1512
PDB: 7Y28 chain A(all domains)

Molecule: Bifunctional glutamate/proline--tRNA ligase

3D Structure

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Related Domains

Browse other domains in ProRS-C_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupC-terminal domain of ProRS(328.2)

TT-groupC-terminal domain of ProRS(328.2.1)

FFamilyProRS-C_1(328.2.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171within 5 Å only
Zinc ionZN
metal
Magnesium ion

Pfam Families

PF09180ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

External Links

ECOD PDB View: 7Y28 RCSB PDB: 7Y28 PDBe: 7Y28

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.