ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lajB1 - ECOD Domain | ECOD

ECOD/Domains/e1lajB1

e1lajB1

UID: 000031131

PDB

Range: B:62-217
PDB: 1LAJ chain B(all domains)
UniProt: P23627 (all domains)
Gene: ORF3b

Molecule: capsid protein

3D Structure

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Related Domains

Browse other domains in Cucumo_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCucumo_coat(10.2.1.10)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00760Cucumo_coat

Cucumovirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1LAJ RCSB PDB: 1LAJ PDBe: 1LAJ UniProt: P23627

Downloads

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