ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j1pB1 - ECOD Domain | ECOD

ECOD/Domains/e2j1pB1

e2j1pB1

UID: 000312597

PDB

Range: B:12-302
PDB: 2J1P chain B(all domains)
UniProt: Q43133 (all domains)
Gene: GGPS1

Molecule: GERANYLGERANYL PYROPHOSPHATE SYNTHETASE

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
(S)-propane-1,2-diolPGO
drugDrugBank DB04349
Geranylgeranyl diphosphate

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 2J1P RCSB PDB: 2J1P PDBe: 2J1P UniProt: Q43133

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.