ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gk6A2 - ECOD Domain | ECOD

ECOD/Domains/e2gk6A2

e2gk6A2

UID: 000312720

PDB

Range: A:700-911
PDB: 2GK6 chain A(all domains)
UniProt: Q92900 (all domains)
Gene: UPF1

Molecule: Regulator of nonsense transcripts 1

3D Structure

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Related Domains

Browse other domains in AAA_12 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_12(2004.1.1.186)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2GK6 RCSB PDB: 2GK6 PDBe: 2GK6 UniProt: Q92900

Downloads

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Drug annotations from DrugDomain.