ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1s55C1 - ECOD Domain | ECOD

ECOD/Domains/e1s55C1

e1s55C1

UID: 000031298

PDB

Range: C:161-316
PDB: 1S55 chain C(all domains)
UniProt: O35235 (all domains)
Gene: Tnfsf11

Molecule: Tumor necrosis factor ligand superfamily member 11

3D Structure

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Related Domains

Browse other domains in TNF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyTNF(10.3.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TNF(Tumour Necrosis Factor) family

ClanCL0100C1q_TNF

External Links

ECOD PDB View: 1S55 RCSB PDB: 1S55 PDBe: 1S55 UniProt: O35235

Downloads

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