ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2oogD1 - ECOD Domain | ECOD

ECOD/Domains/e2oogD1

e2oogD1

UID: 000314509

PDB

Range: D:44-309
PDB: 2OOG chain D(all domains)
UniProt: A6QFH0 (all domains)

Molecule: Glycerophosphoryl diester phosphodiesterase

3D Structure

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Related Domains

Browse other domains in GDPD →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGDPD(2002.1.1.106)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

Glycerophosphoryl diester phosphodiesterase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2OOG RCSB PDB: 2OOG PDBe: 2OOG UniProt: A6QFH0

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.