ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jc0A1 - ECOD Domain | ECOD

ECOD/Domains/e2jc0A1

e2jc0A1

UID: 000314740

PDB

Range: A:354-562
PDB: 2JC0 chain A(all domains)
UniProt: P26663 (all domains)

Molecule: RNA-DEPENDENT RNA-POLYMERASE

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_3(4967.1.1.5)

Ligands

in contact, ≤ 4 Å

(2S,4S,5R)-2-ISOBUTYL-5-(2-THIENYL)-1-[4-(TRIFLUOROMETHYL)BENZOYL]PYRROLIDINE-2,4-DICARBOXYLIC ACID699
drugDrugBank DB07200

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 2JC0 RCSB PDB: 2JC0 PDBe: 2JC0 UniProt: P26663

Downloads

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