ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P44827_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P44827_F1_nD1

P44827_F1_nD1

UID: 003164256

AlphaFold

Range: 46-240
AlphaFold: AF-P44827
UniProt: P44827 (all domains)
Gene: rluE

Protein: Ribosomal large subunit pseudouridine synthase E (EC 5.4.99.20) (rRNA pseudouridylate synthase E) (rRNA-uridine isomerase E)

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_2(304.102.1.1)

Pfam Families

PF00849PseudoU_synth_2

RNA pseudouridylate synthase

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: P44827 UniProt: P44827

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 46-240