ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P43930_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P43930_F1_nD1

P43930_F1_nD1

UID: 003165450

AlphaFold

Range: 1-224
AlphaFold: AF-P43930
UniProt: P43930 (all domains)
Gene: HI_0042

Protein: Uncharacterized RNA pseudouridine synthase HI_0042 (EC 5.4.99.-) (RNA pseudouridylate synthase) (RNA-uridine isomerase)

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_2(304.102.1.1)

Pfam Families

PF00849PseudoU_synth_2

RNA pseudouridylate synthase

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: P43930 UniProt: P43930

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 1-224