ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2dcjB1 - ECOD Domain | ECOD

ECOD/Domains/e2dcjB1

e2dcjB1

UID: 000316570

PDB

Range: B:1-204
PDB: 2DCJ chain B(all domains)
UniProt: Q9RC94 (all domains)
Gene: xynJ

Molecule: xylanase J

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_11 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGlyco_hydro_11(10.1.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Glycerol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00457Glyco_hydro_11

Glycosyl hydrolases family 11

ClanCL0004Concanavalin

External Links

ECOD PDB View: 2DCJ RCSB PDB: 2DCJ PDBe: 2DCJ UniProt: Q9RC94

Downloads

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