ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2f17A1 - ECOD Domain | ECOD

ECOD/Domains/e2f17A1

e2f17A1

UID: 000031663

PDB

Range: A:159-243
PDB: 2F17 chain A(all domains)
UniProt: Q9R0M5 (all domains)
Gene: Tpk1

Molecule: Thiamin pyrophosphokinase 1

3D Structure

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Related Domains

Browse other domains in TPK_B1_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupThiamin pyrophosphokinase, substrate-binding domain(10.11)

TT-groupThiamin pyrophosphokinase, substrate-binding domain(10.11.1)

FFamilyTPK_B1_binding(10.11.1.1)

Ligands

in contact, ≤ 4 Å

Pyrithiamine PyrophosphatePYI
drugDrugBank DB04768

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF04265TPK_B1_binding

Thiamin pyrophosphokinase, vitamin B1 binding domain

External Links

ECOD PDB View: 2F17 RCSB PDB: 2F17 PDBe: 2F17 UniProt: Q9R0M5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.