ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gh6B1 - ECOD Domain | ECOD

ECOD/Domains/e2gh6B1

e2gh6B1

UID: 000316643

PDB

Range: B:2-368
PDB: 2GH6 chain B(all domains)
UniProt: Q70I53 (all domains)
Gene: hdaH

Molecule: Histone deacetylase-like amidohydrolase

3D Structure

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Related Domains

Browse other domains in Hist_deacetyl →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupArginase/deacetylase(2006.1.5)

FFamilyHist_deacetyl(2006.1.5.2)

Ligands

in contact, ≤ 4 Å

9,9,9-TRIFLUORO-8-OXO-N-PHENYLNONANAMIDECF3
drugDrugBank DB07553
Potassium ionK
metal
Zinc ion

Pfam Families

PF00850Hist_deacetyl

Histone deacetylase domain

ClanCL0302Arginase

External Links

ECOD PDB View: 2GH6 RCSB PDB: 2GH6 PDBe: 2GH6 UniProt: Q70I53

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.