ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P41812_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P41812_F1_nD3

P41812_F1_nD3

UID: 003166613

AlphaFold

Range: 211-450,486-505,541-605,661-670,731-740
AlphaFold: AF-P41812
UniProt: P41812 (all domains)
Gene: POP1

Protein: Ribonucleases P/MRP protein subunit POP1 (EC 3.1.26.5) (RNA-processing protein POP1) (RNases P/MRP 100.4 kDa subunit)

3D Structure

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Related Domains

Browse other domains in POP1_N+POPLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAminomethyltransferase folate-binding domain(304.107)

TT-groupAminomethyltransferase folate-binding domain(304.107.1)

FFamilyPOP1_N+POPLD(304.107.1.7)

Pfam Families

Ribonucleases P/MRP protein subunit POP1, N-terminal

POPLD (NUC188) domain

External Links

AlphaFold DB: P41812 UniProt: P41812

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-450,486-505,541-605,661-670,731-740