ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P09880_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P09880_F1_nD3

P09880_F1_nD3

UID: 003170706

AlphaFold

Range: 376-610
AlphaFold: AF-P09880
UniProt: P09880 (all domains)
Gene: TRL1

Protein: tRNA ligase (EC 6.5.1.3)

3D Structure

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Related Domains

Browse other domains in tRNA_lig_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilytRNA_lig_kinase(2004.1.1.284)

Pfam Families

PF08303tRNA_lig_kinase

tRNA ligase kinase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: P09880 UniProt: P09880

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 376-610