ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P48561_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P48561_F1_nD1

P48561_F1_nD1

UID: 003170925

AlphaFold

Range: 171-300,496-505
AlphaFold: AF-P48561
UniProt: P48561 (all domains)
Gene: TRF5

Protein: Poly(A) RNA polymerase protein 1 (EC 2.7.7.19) (Topoisomerase 1-related protein TRF5)

3D Structure

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Related Domains

Browse other domains in MTPAP-like_central →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyMTPAP-like_central(316.1.1.36)

Pfam Families

PF22600MTPAP-like_central

Poly(A) RNA polymerase, mitochondrial-like, central palm domain

ClanCL0260NTP_transf

External Links

AlphaFold DB: P48561 UniProt: P48561

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-300,496-505