ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2o0jA1 - ECOD Domain | ECOD

ECOD/Domains/e2o0jA1

e2o0jA1

UID: 000317607

PDB

Range: A:1-360
PDB: 2O0J chain A(all domains)
UniProt: P17312 (all domains)
Gene: 17

Molecule: DNA packaging protein Gp17

3D Structure

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Related Domains

Browse other domains in Terminase_6N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyTerminase_6N(2004.1.1.99)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03237Terminase_6N

Terminase large subunit, T4likevirus-type, N-terminal

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2O0J RCSB PDB: 2O0J PDBe: 2O0J UniProt: P17312

Downloads

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