ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ixlB1 - ECOD Domain | ECOD

ECOD/Domains/e2ixlB1

e2ixlB1

UID: 000031764

PDB

Range: B:4-197
PDB: 2IXL chain B(all domains)
UniProt: Q8GIQ0 (all domains)
Gene: rmlC

Molecule: DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE

3D Structure

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Related Domains

Browse other domains in dTDP_sugar_isom →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilydTDP_sugar_isom(10.12.1.4)

Ligands

in contact, ≤ 4 Å

2'-Deoxy-thymidine-beta-L-rhamnoseTRH
drugDrugBank DB03723

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00908dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

ClanCL0029Cupin

External Links

ECOD PDB View: 2IXL RCSB PDB: 2IXL PDBe: 2IXL UniProt: Q8GIQ0

Downloads

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