ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nzcC1 - ECOD Domain | ECOD

ECOD/Domains/e1nzcC1

e1nzcC1

UID: 000031769

PDB

Range: C:4-197
PDB: 1NZC chain C(all domains)
UniProt: Q8GIQ0 (all domains)
Gene: rmlC

Molecule: dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase

3D Structure

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Related Domains

Browse other domains in dTDP_sugar_isom →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilydTDP_sugar_isom(10.12.1.4)

Ligands

in contact, ≤ 4 Å

Thymidine-5'-diphospho-beta-D-xyloseTDX
drugDrugBank DB03161
NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00908dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

ClanCL0029Cupin

External Links

ECOD PDB View: 1NZC RCSB PDB: 1NZC PDBe: 1NZC UniProt: Q8GIQ0

Downloads

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