ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2demA1 - ECOD Domain | ECOD

ECOD/Domains/e2demA1

e2demA1

UID: 000318630

PDB

Range: A:1-219
PDB: 2DEM chain A(all domains)
UniProt: Q5SJ65 (all domains)
Gene: udgb

Molecule: uracil-DNA glycosylase

3D Structure

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Related Domains

Browse other domains in UDG →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUracil-DNA glycosylase-like(7569)

HH-groupUracil-DNA glycosylase-like(7569.1)

TT-groupUracil-DNA glycosylase-like(7569.1.1)

FFamilyUDG(7569.1.1.1)

Ligands

in contact, ≤ 4 Å

Dihydrogenphosphate2HP
drugDrugBank DB02831
Iron/sulfur clusterSF4

+ 2 additives (Ethanol, Glycerin)

Ethanol

Pfam Families

Uracil DNA glycosylase superfamily

ClanCL0771UDG-like

External Links

ECOD PDB View: 2DEM RCSB PDB: 2DEM PDBe: 2DEM UniProt: Q5SJ65

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB00898

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.