ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2eg5C1 - ECOD Domain | ECOD

ECOD/Domains/e2eg5C1

e2eg5C1

UID: 000319201

PDB

Range: C:14-367
PDB: 2EG5 chain C(all domains)
UniProt: A4GE69 (all domains)
Gene: XMT1

Molecule: Xanthosine methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_7 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_7(2003.1.5.30)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
9-[(2R,3R,4S,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)OXOLAN-2-YL]-3H-PURINE-2,6-DIONEXTS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03492Methyltransf_7

SAM dependent carboxyl methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2EG5 RCSB PDB: 2EG5 PDBe: 2EG5 UniProt: A4GE69

Downloads

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